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chisq test for DEG

Source: R/territory_identity_and_markers.R
vesalius_deg_chisq.Rd

chisq test for DEG

Usage

vesalius_deg_chisq(seed, seed_id, query, query_id, params)

Arguments

seed

count matrix for group 1

seed_id

territory used in group 1

query

count matrix for group 2

query_id

territory used in group 2

params

parameter value list (pval, log_fc, min_pct)