renaming counts to remain consistent with vesalius nomenclature — rename_counts • vesalius

renaming counts to remain consistent with vesalius nomenclature

Usage

rename_counts(integrated, seed_cells, seed_genes, query_cells, query_genes)

Arguments

integrated: seurat object containing integrated count data
seed_cells: character vector contain seed barcodes
seed_genes: character vector contain seed genes
query_cells: character vector contain query barcodes
query_genes: character vector contain query genes

Value

list of count matrices with cell and gene names added and each matrix is renamed to follow the vesalius nomencalture