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no normalisation applied simply return raw counts

Usage

no_norm(counts, use_count = "raw")

Arguments

counts

seurat object containing counts

use_count

string describing name that needs to be added to list element. This list will be appended to the count slot in the vesalius_assay.

Value

list with seurat object used later and raw counts to be stored in the vesalius objects

Details

Here, either the user doesn't want to normalise the data or they provide their custom count matrix. In this case, we parse it as "none" to avoid writing another function and add the custom name.