get DEG metrics from groups

get DEG metrics from groups

Usage

get_deg_metrics(seed, query, params)

Arguments

seed

count matrix for group 1

query

count matrix for group 2

params

parameter list (pval,log_fc, min_pct)

Details

Computes basic metrics such as fold change and percent of cells containing each gene. This functions is used to filter out genes so we don't run differential expression on all genes. We also compute an effct size estimate by running a power analysis with 2 uneven groups importFrom pwr pwr.2p2n.test